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Issue: Vol. 48 No. 1: 4 Dec. 2024
Type: Article
Published: 2024-12-04
DOI: 10.11646/bde.48.1.1
Page range: 1-11
Abstract views: 71
PDF downloaded: 3

Complete chloroplast genome of Marchantia emarginata subsp. cuneiloba (Marchantiaceae, Marchantiophyta): towards organellar phylogenomics of a model liverwort, Marchantia

Hattori Botanical Laboratory, Obi 6-1-26, Nichinan City, Miyazaki 889-2535, Japan
Hattori Botanical Laboratory, Obi 6-1-26, Nichinan City, Miyazaki 889-2535, Japan, Department of Botany, National Museum of Nature and Science, Tsukuba, Ibaraki, Japan
Program of Basic Biology, Graduate School of Integrated Sciences for Life, Hiroshima University, 1-3-1 Kagamiyama, Higashihiroshima, Hiroshima 739-8526, Japan
Algae Chloroplast genome East Asia Marchantia Marchantiales

Abstract

The complete chloroplast genome sequence of Marchantia emarginata subsp. cuneiloba (Marchantiaceae) was determined. The chloroplast genome was 122,531 bp in length and displayed a typical circular structure composed of a large single-copy region, a small single-copy region, and a pair of inverted repeats. It contains 128 genes, namely 89 protein-coding genes, 35 tRNA genes, and four rRNA genes. Both substitution-based and indel-based phylogenetic trees support the sister relationship of M. emarginata subsp. cuneiloba with M. inflexa. Comparative analysis of chloroplast genome also reveals the usefulness of simple sequence repeat (SSR) patterns for classification in the genus Marchantia.

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