Skip to main content Skip to main navigation menu Skip to site footer
Type: Article
Published: 2019-03-04
Page range: 482–490
Abstract views: 96
PDF downloaded: 3

Description of Basiria khouzestanensis n. sp. (Nematoda: Tylenchidae) from Iran and its phylogenetic relationships with other species in the family

Department of Plant Protection, College of Agriculture, Shahid Chamran University of Ahvaz, P.O. Box 61357-83151, Ahvaz, Iran.
Department of Plant Protection, College of Agriculture, Shahid Chamran University of Ahvaz, P.O. Box 61357-83151, Ahvaz, Iran.
Department of Plant Protection, College of Agriculture, Shahid Chamran University of Ahvaz, P.O. Box 61357-83151, Ahvaz, Iran.
Nematoda 28S rDNA gene morphology morphometrics new species phylogeny taxonomy

Abstract

Basiria khouzestanensis n. sp., recovered from the rhizosphere of orange in Khouzestan Province, south-western Iran, is described and illustrated based on morphological, morphometric and molecular data. The new species is characterized by having short body length (430–635 µm), lateral fields composed of four incisures, with non areolated bands, cephalic region smooth and continuous with body contour, stylet 9–12.5 µm long, basal bulb short and pyriform to slightly cylindrical, V = 63.3 (58–65.5), spermatheca non-offset, tail elongate-conoid, tail tip with various shapes and males with 16.5 (15–18) μm long spicules. Morphologically, the new species is similar to five known species of the genus: B. babhi, B. brevia, B. graminophila, B. lauta and B. shahidi. Morphological comparisons with these species are discussed. The sequence of the D2–D3 expansion segments of 28S rDNA gene for the new species was also used for molecular phylogenetic analysis. The phylogenetic relationships of the new species in relation to representatives of the family Tylenchidae, obtained from Bayesian inference (BI) analysis of the D2–D3 sequences, are presented and discussed. The new species clusters in a subclade containing three unidentified species of the genus Basiria from Iran with high support.

 

References

  1. Alvani, S., Mahdikhani Moghadam, E., Rouhani, H., Mohammadi, A. & Karssen, G. (2016) Description of Basiria birjandiensis n. sp (Nematoda: Tylenchidae) from South Khorasan province with a checklist of the family Tylenchidae Örley 1880 from Iran. Zootaxa, 4085 (3), 345–373.

    https://doi.org/10.11646/zootaxa.4085.3.2

    Atighi, M.R., Pourjam, E., Pereira, T.J., Okhovvat, S.M., Alizada, B.A., Mundo-Ocampo, M. & Baldwin, J.G. (2013) Redescription of Filenchus annulatus (Siddiqui & Khan, 1983) Siddiqi, 1986 based on specimens from Iran with contributions to the molecular phylogeny of the Tylenchidae. Nematology, 15, 129–141.

    https://doi.org/10.1163/156854112X649819

    Azimi, S., Mahdikhani Moghadam, E., Rouhani, H. & Rajabi Memari, H. (2016) Morphological, morphometric and molecular characterization of Merlinius microdorus (Geraert, 1966) Siddiqi, 1970, Scutylenchus rugosus (Siddiqi, 1963) Siddiqi, 1979 (Merliniidae), and Psilenchus curcumerus Rahaman, Ahmad & Jairajpuri, 1994 (Psilenchidae) and approaches to phylogenetic relationships. Redia-Giornale di Zoologia, 99, 9–18.

    https://doi.org/10.19263/REDIA-99.16.03

    Carta, L.K., Skantar A.M. & Handoo Z.A. (2010) Molecular rDNA phylogeny of Telotylenchidae Siddiqi, 1960 and evaluation of tail termini. Journal of Nematology, 42, 359–369.

    De Grisse, A.T. (1969) Redescription ou modification de quelques techniques utilissée dans l’étude des nematodes phytoparasitaires. Mededelingen Rijksfaculteit Landbouwwetenschappen Gent, 34, 351–369.

    Geraert, E. (2008) The Tylenchidae of the world. Identification of the family Tylenchidae (Nematoda). Ghent, Belgium, Academia Press, 540 pp.

    Ghaderi, R., Karegar, A., Niknam, G. & Subbotin, S.A. (2014) Phylogenetic relationships of Telotylenchidae Siddiqi, 1960 and Merliniidae Siddiqi, 1971 (Nematoda: Tylenchida) from Iran, as inferred from the analysis of the D2D3 expansion fragments of 28S rRNA gene sequences. Nematology, 16, 863–877.

    https://doi.org/10. 1163/15685411-00002815

    Ghaderi, R., Kashi, L. & Karegar, A. (2012) The nematodes of Iran, based on the published reports until 2011. Agricultural Education and Extension Publication, Tehran, Iran.

    Hashim, Z. (1985) The status of Neobasiria Javed, 1982 and a re-diagnosis of Basiria Siddiqi, 1959 (Nematoda: Tylenchida). Nematologica, 30, 238–241.

    https://doi.org/10.1163/187529284X00149

    Huson, D.H. & Scornavacca, C. (2012) Dendroscope 3: An interactive tool for rooted phylogenetic trees and networks. Systematic Biology, 61, 1061–1067.

    https://doi.org/ 10.1093/sysbio/ sys062

    Jenkins, W.R. (1964) A rapid centrifugal flotation technique for separating nematodes from soil. Plant Disease Reporter, 48, 692.

    Khan, S.H. (1973) On the proposal for Neothada n. gen. (Nematoda: Tylenchinae). Proceedings of the National Academy of Sciences, India, Biological Sciences, 43, 17–18.

    Khan, M.L. (1982) Species of Basiria Siddiqi, 1959 associated with fruit trees in India (Nematoda: Psilenchinae). Indian Journal of Nematology, 12, 99–106.

    Konani, E., Panahandeh, Y., Pourjam, E., Alvarez-Ortega, S. & Pedram, M. (2018) Two rare species of tylenchids, Discotylenchus biannulatus n. sp. and Labrys chinensis Qing & Bert, 2018 (Nematoda: Tylenchidae) from western Iran. Zootaxa, 4413, 260–270.

    https://doi.org/10.11646/zootaxa.4413.2.2

    Larget, B. & Simon, D.L. (1999) Markov chain Monte Carlo algorithms for the Bayesian analysis of phylogenetic trees. Molecular Biology and Evolution, 16, 750–759.

    https://doi.org/10.1093/oxfordjournals.molbev.a026160

    Nunn, G.B. (1992) Nematode molecular evolution. Ph.D. Dissertation, University of Nottingham, UK.

    Nylander, J.A.A. (2004) MrModeltest v2. Evolutionary Biology Centre, Uppsala University, Sweden. Available online at https://github. com/nylander/MrModeltest2 (Accessed 14 April 2014)

    Palomares-Rius, J.E., Subbotin, S.A., Liébanas, G., Landa, B.B. & Castillo, P. (2009) Eutylenchus excretorius Ebsary & Eveleigh, 1981 (Nematoda: Tylodorinae) from Spain with approaches to molecular phylogeny of related genera. Nematology, 11, 343–354.

    https://doi.org/10. 1163/156854109X446944

    Panahandeh, Y., Pourjam, E., Aliramaji, F. & Pedram, M. (2015) Data on some members of the family Tylenchidae (Nematoda: Tylenchina) from Iran. Biologia, 70, 1376–1387.

    https://doi.org/10.1515/biolog-2015-0160

    Panahandeh, Y., Pourjam, E., Roshan-Bakhsh, A. & Pedram, M. (2018) First record of the genus Sakia Khan, 1964 (Nematoda: Tylenchidae) from Iran, with proposal of Sakia arboris n. sp. Nematology, 20, 449–460.

    https://doi.org/10.1163/15685411-00003150

    Pedram, M., Pourjam, E., Ye, W., Atighi, M.R., Robbins, R.T. & Ryss, A. (2011) Description of Bursaphelenchus mazandaranense sp. n. (Nematoda: Parasitaphelenchidae) from Iran. Russian Journal of Nematology, 19,121–129.

    https://doi.org/10.1163/15685411-00003036

    Pedram, M., Soleymanzadeh, M., Pourjam, E. & Mobasseri, M. (2018) Observations on Malenchus geraerti n. sp. (Rhabditida: Tylenchidae), a morphological and molecular phylogenetic study. Zootaxa, 4369, 406–418.

    https://doi.org/10.11646/zootaxa. 4369.3.6

    Qing, X. & Bert, W. (2018) 3D printing in zoological systematics: integrative taxonomy of Labrys chinensis gen. nov., sp. nov. (Nematoda: Tylenchomorpha). Journal of Zoological Systematics and Evolutionary Research, 56, 35–47.

    https://doi.org/10.1111/jzs.12191

    Qing, X., Decraemer, W., Claeys, M. & Bert, W. (2017) Molecular phylogeny of Malenchus and Filenchus (Nematoda: Tylenchidae). Zoologica Scripta, 46, 625–636.

    https://doi.org/10.1111/zsc. 12236

    Qing, X., Pereira, T.J., SLOS, D., Couvreur, M. & Bert, W. (2018) A new species of Malenchus (Nematoda: Tylenchomorpha) with an updated phylogeny of the Tylenchidae. Nematology, 1–22.

    https://doi.org/10.1163/15685411-00003177

    Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572–1574.

    https://doi.org/10.1093/bioinformatics/btg180

    Siddiqi, M.R. (1959) Basiria graminophila n. g., n. sp., (Nematoda: Tylenchinae) found associated with grass roots in Aligarh, India. Nematologica, 4, 217–222.

    https://doi.org/10.1163/187529259X00246

    Siddiqi, M.R. (1986) Tylenchida: parasites of plants and insects. Farnham Royal, London: Commonwealth Agricultural Bureaux, UK, 645 pp.

    Soleymanzadeh, M., Pedram, M., Pourjam, E. & Álvarez Ortega, S. (2016) Description of Lelenchus brevislitus n. sp. (Nematoda: Tylenchidae), an example of a cryptic species from Iran and its phylogenetic relationships with other species in the family. Nematology, 18, 987–998.

    https://doi.org/10.1163/1568541100003010

    Subbotin, S.A., Sturhan, D., Chizhov, V.N., Vovlas, N. & Baldwin, J.G. (2006) Phylogenetic analysis of Tylenchida Thorne, 1949 as inferred from D2 and D3 expansion fragments of the 28S rRNA gene sequences. Nematology, 8, 455–474.

    https://doi.org/10.1163/156854106778493420

    Sultana, S. (1980) Four new species of the genus Basiroides Thome & Malek, 1968 (Nematoda: Psilenchinae) from Andhra Pradesh. Geobios, 7, 134–139.

    Thorne, G. (1941) Some nematodes of the family Tylenchidae, which do not possess a valvular median oesophageal bulb. Great Basin Naturalist, 2, 37–85.

    Whitehead, A.G. & Hemming, J.R. (1965) A comparison of some quantitative methods of extracting small vermiform nematodes from soil. Annals of Applied Biology, 55, 25–38.

    https://doi.org/10.1111/j.1744-7348.1965.tb07864.x

    Yaghoubi, A., Pourjam, E., Álvarez-Ortega, S., Liébanas, G., Atighi, M.R. & Pedram, M. (2016) Discopersicus n. gen., a new member of the family Tylenchidae Örley, 1880 with detailed SEM study on two known species of the genus Discotylenchus Siddiqi, 1980 (Nematoda: Tylenchidae) from Iran. Journal of Nematology, 48, 214–221.