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Type: Article
Published: 2020-06-08
Page range: 266–280
Abstract views: 154
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Molecular and morphological characters of Helicotylenchus Steiner, 1945 species from Iran with a note on the identity of H. pseudorobustus (Steiner, 1914) Golden, 1956

Plant Protection Department, Shahid Bahonar University, Kerman, Iran
Green Biotechnologies Research Centre of Excellence, University of Limpopo, Private Bag X1106, Sovenga 0727, South Africa
National Collection of Nematodes, Biosystematics, Agricultural Research Council, Plant Health and Protection, (ARC-PHP), Private Bag X134, Queenswood 0121, South Africa
Green Biotechnologies Research Centre of Excellence, University of Limpopo, Private Bag X1106, Sovenga 0727, South Africa
Nematoda 28S rDNA hierarchical clustering morphology phylogeny spiral nematode

Abstract

Helicotylenchus species were recovered from natural areas of three provinces (Mazandaran, Kerman and Guilan) in Iran, with morphological and molecular characteristics suggesting that they were Helicotylenchus minzi and Helicotylenchus pseudorobustus. A phylogenetic analysis of the two Helicotylenchus species using 28S rDNA placed H. pseudrobustus and H. minzi in a clade with 1.00 posterior probability. Results suggest that the Helicotylenchus population identified using molecular characteristics as H. pseudorobustus is a paraphyletic group, with hierarchical clustering analysis indicating a close relationship between the Iranian and the Chinese populations of H. pseudorobustus. In conclusion, further molecular studies within the genus Helicotylenchus are needed, especially for morphologically similar populations that have been recognized as separate species.

 

References

  1. Andrássy, I. (1973) 100 neue Nematodenarten in den ungarischen Fauna. Opiscula Zoolica Budapest, XI, 7–48.

    Bagatyriya, N.L. (1971) [Nematode fauna of sugar beat in eastern Georgian SSR] Soobscheniya Akademii Nauk Gruzinskoi SSR, 63, 217–220. [in Russian]

    Bae, C.H., Szalanski, A.L. & Robbins, R.T. (2009) Phylogenetic analysis of Hoplolaiminae inferred from combined D2 and D3 expansion segments of 28S rDNA. Journal of Nematology, 41, 28–34.

    Baermann, G. (1917) Eine einfache Methode zur Auffindung von Ankylostomum (Nematoden) Larven in Erdproben. Geneeskunding Tijdschrift voor Nederlandsch-Indië, 57, 131–137.

    Barooti, S. & Geraert, E. (1994) Some plant parasitic nematodes (Tylenchida) from Iran. Abstracts of the 22nd International Symposium of the European Society of Nematologists, Gent, 33 pp.

    Brzeski, M.W. (1998) Nematodes of Tylenchina in Poland and temperate Europe. Museum I Instytut ZoologiiPolska Akademia Nauk, Warszawa, 393 pp.

    Cobb, N.A. (1893) Plant diseases and their remedies. III. Nematode worms found attacking sugar-cane. Agricultural Gazette of New South Wales, 4, 808–833.

    Cobb, N.A. (1913) New nematode genera found inhabiting fresh water and non-brackish soils. Journal of the Washington Academy of Sciences, 3, 432–444.

    https://doi.org/10.5962/bhl.part.20323

    De Grisse, A. (1969) Redescription ou modifications de quelques techniques utililisées dans l’étude des nématodes phytoparasitaires. Mededelingen van de Rijksfaculteit Landbouwetenschappen Gent, 34, 351–369.

    Divsalar, N., Shokoohi, E., Hoseinipour, A. & Mashela, P.W. (2019) Molecular and morphological variation of the root lesion nematode, Pratylenchus neglectus, Biologia, 74 (3), 257–267.

    https://doi.org/10.2478/s11756-018-00165-z

    Floyd, R., Eyualem Abebe, Papert, A. & Blaxter, M. (2002) Blackwell Science Ltd Molecular barcodes for soil nematode identification. Molecular Ecology, 11, 839–850.

    https://doi.org/10.1046/j.1365-294X.2002.01485.x

    Fortuner, R. (1984) Morphometrical variability in Helicotylenchus Steiner, 1945. 6: Value of the characters used for specific identification. Revue de Nématologie, 7, 245–264.

    Fortuner, R., Maggenti, A.R. & Whittaker, L.M. (1984) Morphometrical variability in Helicotylenchus Steiner, 1945. 4: Study of field populations of H. pseudorobustus and related species. Revue de Nématologie, 7, 121–135.

    Fortuner, R., Pierre-Yves, L. & Dominique, G. (2018) On the morphometric identity of populations of Helicotylenchus pseudorobustus (Steiner, 1914) Golden, 1956 (Tylenchida: Hoplolaimidae). Nematology, 20, 423–429.

    https://doi.org/10.1163/15685411-00003148

    Fotedar, D.N. & Kaul, V. (1986) A revised key to the species of genus Helicotylenchus Steiner, 1945 (Nematoda: Rotylenchoidinae). Indian Journal of Nematology, 15, 138–147.

    Golden, M.A. (1956) Taxonomy of the spiral nematodes (Rotylenchus and Helicotylenchus), and the developmental stages and host-parasite relationships of R. buxophilus n. sp. attacking boxwood. University of Maryland, Agricultural Experiment Station Bulletin, A–85, 1–28.

    Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95–98.

    Kashi, L. & Karegar, A. (2014) Description of Helicotylenchus persiaensis sp. n. (Nematoda: Hoplolaimidae) from Iran. Zootaxa, 3785 (4), 575–588.

    https://doi.org/10.11646/zootaxa.3785.4.6

    Katalan-Gateva, Sh. (1980) [Ectoparasitic nematodes of the family Hoplolaimidae Filipjev, 1934 found in the rhizosphere of the vine (Vitis vinifera L.). Acta Zoologica Bulgarica, 14, 9–63. [in Bulgarian]

    Kleynhans, K.P.N., Van Den Berg, E., Swart, A., Marais, M. & Buckley, N.H. (1996) Plant nematodes in South Africa. Plant Protection Research Institute Handbook No. 8. ARC-Plant Protection Research Institute, Pretoria, 165 pp.

    Marais, M. (2001) A monograph of the genus Helicotylenchus Steiner, 1945 (Nemata: Hoplolaimidae). Ph.D. Dissertation, University of Stellenbosch, Stellenbosch, 293 pp.

    McCarthy, C. (1997) Chromas. Version 1.41. Griffith University, Brisbane. [program]

    Mohammad Deimi, A. & Mitkowski, N. (2010) Nematodes associated with vineyards throughout Markazi Province (Arak), Iran. Australian Plant Pathology, 39, 571–577.

    https://doi.org/10.1071/AP10044

    Perry, V.G., Darling, H.M. & Thorne, G. (1959) Anatomy, taxonomy and control of certain spiral nematodes attacking blue grass in Wisconsin. University of Wisconsin, Agricultural Experiment Station, Research Bulletin, 207, 1–24.

    Posada, D. (2008) jModelTest: phylogenetic model averaging. Molecular Biology and Evolution, 25, 1253–1256.

    https://doi.org/10.1093/molbev/msn083

    Rathore, Y.S. & Tiwari, S.N. (2016) Relationships of Species of Helicotylenchus with Taxonomic Groupings of Host Plants. Journal of Plant Science Research, 3 (1), 145.

    Ronquist, F. & Huelsenbeck, J. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572–1574.

    https://doi.org/10.1093/bioinformatics/btg180

    Sauer, M. & Winoto, R. (1975) The genus Helicotylenchus Steiner, 1945 in West Malaysia. Nematologica, 21, 341–350.

    https://doi.org/10.1163/187529275X00077

    Schreck Reis, C., Vieira Dos Santos, M.C., Marais, M., Santos, M.S.N.A., Duyts, H., Freitas, H., Van Der Putten, W.H. & Abrantes, I.M.D.O. (2010) First record of Helicotylenchus varicaudatus Yuen, 1964 (Nematoda: Hoplolaimidae) parasitizing Ammophila arenaria (L). Links in Portuguese coastal sand dunes. Phytopathologia Mediterranea, 49, 212–226.

    Sher, S.A. (1961) Revision of the Hoplolaiminae (Nematoda) I. Classification of nominal genera and nominal species. Nematologica, 6, 155–169.

    https://doi.org/10.1163/187529261X00414

    Sher, S.A. (1966) Revision of the Hoplolaiminae (Nematoda) VI. Helicotylenchus Steiner, 1945. Nematologica, 12, 1–56.

    https://doi.org/10.1163/187529266X00013

    Shokoohi, E., Marais, M., Fourie, H. & Panahi, H. (2018) Morphological and molecular characterization of three Helicotylenchus species from Iran. Zootaxa, 4388 (2), 207–220.

    https://doi.org/10.11646/zootaxa.4388.2.4

    Siddiqi, M.R. (1972) On the genus Helicotylenchus Steiner, 1945 (Nematoda: Tylenchida), with descriptions of nine new species. Nematologica, 18, 74–91.

    https://doi.org/10.1163/187529272X00278

    Steiner, G. (1914) Freilebende Nematodes aus der Schweiz. 1. Teil einer vorläufigen Mitteilung. Archiv für Hydrobiologieund Planktonkunde, 9, 259–276.

    Steiner, G. (1945) Helicotylenchus, a new genus of plant-parasitic nematodes and its relationship to Rotylenchus Filipjev. Proceedings of the Helminthological Society of Washington, 12, 34–38.

    Subbotin, S.A., Inserra, R.N., Marais, M., Mullin, P., Powers, T.O., Roberts, P., Van den Berg, E., Yeates, G.W. & Baldwin, J.G. (2011) Diversity and phylogenetic relationships within the spiral nematodes of Helicotylenchus Steiner, 1945 (Tylenchida: Hoplolaimidae) as inferred from analysis of the D2–D3 expansion segments of 28S rRNA gene sequences. Nematology, 13, 333–345.

    https://doi.org/10.1163/138855410X520936

    Subbotin, S.A., Sturhan, D., Chizhov, V.N., Vovlas, N. & Baldwin, J.G. (2006) Phylogenetic analysis of Tylenchida Thorne, 1949 as inferred from D2 and D3 expansion fragments of the 28S rRNA gene sequences. Journal of Nematology, 8, 455–474.

    https://doi.org/10.1163/156854106778493420

    Subbotin, S.A., Vovlas, O., Yeates, G.W., Hallmann, J., Kiewnick, S., Chizhov, V.N., Manzanilla-López, R.H., Inserra, R.N. & Castillo, P. (2015) Morphological and molecular characterisation of Helicotylenchus pseudorobustus (Steiner, 1914) Golden, 1956 and related species (Tylenchida: Hoplolaimidae) with a phylogeny of the genus. Nematology, 17, 27–52.

    https://doi.org/10.1163/15685411-00002850

    Suzuki, R. & Shimodaira, H. (2015) Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling. Version 2.0-0. Available from: cran.r-project.org/web/packages/pvclust/pvclust (accessed 10 July 2017)

    Thorne, G. (1935) Nemic parasites and associates of the mountain pine beetle (Dendroctonus monicolae) in Utah. Journal of Agricultural Research U.S. Department of Agriculture, 51, 131–144.

    Uzma, I., Nasira, K., Firoza, K. & Shahina, F. (2015) Review of the genus Helicotylenchus Steiner, 1945 (Nematoda: Hoplolaimidae) with updated diagnostic compendium. Pakistan Journal of Nematology, 33, 115–160.

    https://doi.org/10.18681/2015.v33.i02.p01201507310001

    Wouts, W.M. & Yeates, G.W. (1994) Helicotylenchus species (Nematoda: Tylenchida) from native vegetation and undisturbed soils in New Zealand. New Zealand Journal of Zoology, 21, 213–224.

    https://doi.org/10.1080/03014223.1994.9517988

    Yuen, P. (1964) Four new species of Helicotylenchus Steiner (Hoplolaimidae: Tylenchida) and a redescription of H. canadensis Waseem, 1961. Nematologica, 10, 373–387.

    https://doi.org/10.1163/187529264X00385

    Zhang, X., Wang, D., Shi, A. & Li, Q. (1998) The investigation and identification of plant parasitic nematodes on ornamental plants in Baotou area. Forest Research, 11, 175–178. [ in Chinese]