Skip to main content Skip to main navigation menu Skip to site footer
Type: Article
Published: 2020-10-20
Page range: 515–543
Abstract views: 337
PDF downloaded: 6

Bathyraja (Arctoraja) sexoculata sp. nov., a new softnose skate (Rajiformes: Arhynchobatidae) from Simushir Island, Kuril Islands (western North Pacific), with special reference to geographic variations in Bathyraja (Arctoraja) smirnovi

Tohoku National Fisheries Research Institute, Japan Fisheries Research and Education Agency, National Research and Development Agency, 25-259 Shimomekurakubo, Same, Hachinohe, Aomori 031-0841, Japan
Russian Federal Research Institute of Fisheries and Oceanography (VNIRO), 17, V. Kransnoselskaya, Moscow 107140, Russia A.N. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences, 33, Leninsky Prospekt, Moscow, 119071, Russia Dagestan State University, 43a, Gadzhiyev St., Makhachkala, 367000, Russia Caspian Institute of Biological Resources, Dagestan Scientific Center of the Russian Academy of Sciences, 45, Gadzhiyev St., Makhachkala, 367000, Russia
Russian Federal Research Institute of Fisheries and Oceanography (VNIRO), 17, V. Kransnoselskaya, Moscow 107140, Russia
Russian Federal Research Institute of Fisheries and Oceanography (VNIRO), 17, V. Kransnoselskaya, Moscow 107140, Russia
W&I Associates Co. Ltd., 1020-39 Kudencho, Sakae-ku, Yokohama, Kanagawa 247-0014, Japan
Hokkaido National Fisheries Research Institute, Japan Fisheries Research and Education Agency, National Research and Development Agency, 116 Katsurakoi, Kushiro, Hokkaido 085-0802, Japan
Japan Sea National Fisheries Research Institute, Japan Fisheries Research and Education Agency, National Research and Development Agency, 1-5939-22 Suido-cho, Chuo-ku, Niigata 951-8121, Japan
Japan Sea National Fisheries Research Institute, Japan Fisheries Research and Education Agency, National Research and Development Agency, 1-5939-22 Suido-cho, Chuo-ku, Niigata 951-8121, Japan
Laboratory of Marine Biology, Faculty of Science and Technology, Kochi University, 2-5-1 Akebono-cho, Kochi 780-8520, Japan
Maizuru Fisheries Research Station, Field Science Education and Research Center, Kyoto University, Nagahama, Maizuru, Kyoto 625-0086, Japan. mebaru@kais.kyoto-u.ac.jp;
Pisces New species COI Chondrichthyes Bathyraja Arctoraja Western North Pacific

Abstract

A new species of softnose skate (Arhynchobatidae), Bathyraja sexoculata Misawa, Orlov, Orlova, Gordeev and Ishihara is described on the basis of five specimens collected from off the east coast of Simushir Island, Kuril Islands, located in the western North Pacific. The specimens conformed to the genus Bathyraja by having the anteriormost pectoral-fin skeleton almost reaching the snout tip, and a slender unsegmented rostral cartilage. Within Bathyraja, the new species belongs to the subgenus Arctoraja (currently with four valid species) due to the relatively short tail (79–86% of disc width), high count of predorsal caudal vertebrae (more than 86), and large strong nuchal and scapular thorns. It is most similar to Bathyraja (Arctoraja) smirnovi, distributed in the Seas of Japan and Okhotsk, in having tail thorns not extending to the nuchal area, median thorns discontinuous from the nape to the tail, and no mid-dorsal thorns. However, B. sexoculata can be distinguished from B. smirnovi by the following characters: three pairs of white blotches on the dorsal disc surface (vs. blotches absent, or a pair of white or dark blotches in B. smirnovi), dark blotch around cloaca, dark bands along mid ventral line of tail (vs. dark blotch and band usually absent ventral disc surface in B. smirnovi), 86–93 predorsal caudal vertebrae (vs. 80–87 in B. smirnovi), and a unique mitochondrial DNA cytochrome c oxidase subunit I sequence. Proportional measurements, including disc width, disc length, head length, preoral length, prenarial length, internarial distance, eye diameter, and tail length, also differ between the two species. For the referential purpose, geographical variations of B. smirnovi distributed in the Seas of Japan and Okhotsk are analyzed and clarified based on morphological and genetic data. Significant morphological and genetic differences were found between local populations in the Seas of Japan and Okhotsk.

 

References

  1. Bean, T.H. (1881) Descriptions of new fishes from Alaska and Siberia. Proceedings of the United States National Museum, 4 (210), 144–159.

    https://doi.org/10.5479/si.00963801.4-210.144

    Cariani, A., Messinetti, S., Ferrari, A., Arculeo, M., Bonello, J. J., Bonnici, L., Cannas, R., Carbonara, P., Cau, A., Charilaou, C., Ouamari, N.E., Fiorentino, F., Follesa, M.C., Garofalo, G., Golani, D., Guarniero, I., Hanner, R., Hemida, F., Kada, O., Brutto, S.L., Mancusi, C., Morey, G., Schembri, P.J., Serena, F., Sion, L., Stagioni, M., Tursi, A., Vrgoc, N., Steinke, D. & Tinti, F. (2017) Improving the conservation of Mediterranean chondrichthyans: The elasmomed DNA barcode reference library. PloS One, 12 (1), e0170244.

    https://doi.org/10.1371/journal.pone.0170244

    Chevolot, M., Hoarau, G., Rijnsdorp, A.D., Stam, W. T. & Olsen, J.L. (2006) Phylogeography and population structure of thornback rays (Raja clavata L., Rajidae). Molecular Ecology, 15, 3693–3705.

    https://doi.org/10.1111/j.1365-294X.2006.03043.x

    Dolganov, V.N. (2001) Origin and distribution of skates of the suborder Rajoidei of the Far East seas of Russia. Jornal of Ichthyology, 41 (5), 354–361. [translated from Voprosy Ikhtiologii, 41 (3), 304–311]

    Dolganov, V.N. & Korolev, M.R. (2006) On validity of the skate species from parmifera group of the genus Bathyraja (Rajidae, Rajoidei). Izvestiya TINRO, 147, 179–182. [in Russian. English abstract]

    Ebert, D.A. & Compagno, L.J.V. (2007) Biodiversity and systematic of skates (Chondrichthyes: Rajiformes: Rajoidei). Environmental Biology of Fishes, 80, 111–124.

    https://doi.org/10.1007/s10641-007-9247-0

    Excoffier, L. & Lischer, H.E.L. (2010) Arlequin suite ver. 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564–567.

    https://doi.org/10.1111/j.1755-0998.2010.02847.x

    Ferrari, A., Tinti, F., Maresca, V.B., Velonà, A., Cannas, R., Thasitis, I., Costa, F.O., Follesa, M.C., Golani, D., Hemida, F., Helyar, S.J., Mancusi, C., Mulas, A., Serena, F., Sion, L., Stagioni, M. & Cariani, A. (2018) Natural history and molecular evolution of demersal Mediterranean sharks and skates inferred by comparative phylogeographic and demographic analyses. 2018. Peer J, 6, e5560.

    https://doi.org/10.7717/peerj.5560

    Gordeev, I. & Polyakova, T. (2020) Helminths and the stomach contentment of Bathyraja sp. (Rajiformes: Arhynchobatidae) in the Simushir Island area (Pacific Ocean). Journal of Asia-Pacific Biodiversity, 13 (2020), 306–309.

    https://doi.org/10.1016/j.japb.2020.03.005

    Grigorov, I.V. & Orlov, A.M. (2013) Species diversity and conservation status of cartilaginous fishes (Chondrichthyes) of Russian waters. Journal of Ichthyology, 53 (11), 923–936.

    https://doi.org/10.1134/S0032945213110040

    Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95–98.

    Hatooka, K., Yamada, U. & Aizawa, M. (2002) Rajidae. In: Nakabo, T. (Ed.), Fishes of Japan with pictorial keys to the species. English Edition. Tokai University Press, Tokyo, pp. 164–174 + 1446–1448.

    Hatooka, K., Yamada, U., Aizawa, M., Yamaguchi, A. & Yagishita, N. (2013) Rajidae. In: Nakabo, T. (Ed.), Fishes of Japan with pictorial keys to the species. 3rd Edition. Tokai University Press, Hadano, pp. 205–216 + 1771–1773. [in Japanese]

    Hubbs, C.L. & Ishiyama, R. (1968) Methods for the taxonomic study and description of skate (Rajidae). Copeia, 1968 (3), 482–491.

    https://doi.org/10.2307/1442016

    Iglésias, S.P. & Lévy-Hartmann, L. (2012) Bathyraja leucomelanos, a new species of softnose skate (Chondrichthyes: Arhynchobatidae) from New Caledonia. Ichthyological Research, 59 (1), 38–48.

    https://doi.org/10.1007/s10228-011-0254-y

    Iguchi, A., Takai, S., Ueno, M., Maeda, T., Minami, T. & Hayashi, I. (2007) Comparative analysis on the genetic population structures of the deep-sea whelks Buccinum tsubai and Neptunea constricta in the Sea of Japan. Marine Biology, 151 (1), 31–39.

    https://doi.org/10.1007/s00227-006-0433-y

    Iguchi, A., Ueno, M., Maeda, T., Minami, T. & Hayashi, I. (2004) Genetic population structure of the deep-sea whelk Buccinum tsubai in the Japan Sea. Fisheries Science, 70 (4), 569–572.

    https://doi.org/10.1111/j.1444-2906.2004.00842.x

    Ishihara, H. (1990) Studies on the systematics and resources of the skates (Rajidae) in the North Pacific Ocean. PhD. Thesis, Tokyo University, Tokyo, 186 pp.

    Ishihara, H. & Ishiyama, R. (1985) Two new North Pacific skates (Rajidae) and a revised key to Bathyraja in the area. Japanese Journal of Ichthyology, 32 (2), 143–179.

    https://doi.org/10.1007/BF02938446

    Ishihara, H. & Ishiyama, R. (1986) Systematics and distribution of the skates of the North Pacific (Chondrichthyes, Rajoidei). In: Uyeno, T., Arai, R., Taniuchi, T. & Matsuura, K. (Eds.), Indo-Pacific Fish Biology. The Ichthyological Society of Japan, Tokyo, pp. 269–280.

    Ishihara, H. & Orlov, A. M. (2009) Bathyraja smirnovi. IUCN Red List of Threatened Species 2009. Version 3.1. Available from: http://www.iucnredlist.org (accessed 28 July 2018)

    Ishiyama, R. (1958) Studies on the rajid fishes (Rajidae) found in the waters around Japan. Journal of the Shimonoseki College of Fisheries, 7 (2/3), 193–394, pls. 1–3.

    Ishiyama, R. (1967) Fauna Japonica. Rajidae (Pisces). Biogeographical Society of Japan, Tokyo, vi + 84 pp., 32 pls.

    Ishiyama, R. & Hubbs, C.L. (1968) Bathyraja, a genus of Pacific skates (Rajidae) regarded as phyletically distinct from the Atlantic genus Breviraja. Copeia, 1968 (2), 407–410.

    https://doi.org/10.2307/1441772

    Ishiyama, R. & Ishihara, H. (1977) Five new species of skates in the genus Bathyraja from the western North Pacific, with reference to their interspecific relationships. Japanese Journal of Ichthyology, 24 (2), 71–90.

    Jeong, C.H. & Nakabo, T. (2009) Hongeo, a new skate genus (Chondrichthyes: Rajidae), with redescription of the type species. Ichthyological Resarch, 56 (2), 140–155.

    https://doi.org/10.1007/s10228-008-0083-9

    Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution, 16 (2), 111–120.

    https://doi.org/10.1007/BF01731581

    Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33 (7), 1870–1874.

    https://doi.org/10.1093/molbev/msw054

    Last, P.R., Stehmann, M.F.W., Séret, B. & Weigmann, S. (2016) 20 Softnose skates Family Arhynchobatidae. In: Last, P.R., White, W.T., de Carvalho, M.R., Séret, B., Stehmann, M. F.W. & Naylor, G.J.P. (Eds.), Rays of the world. CSIRO Publishing, Melbourne, pp. 364–472.

    https://doi.org/10.1071/9780643109148

    Last, P.R., White, W.T., Pogonoski, J.J. & Gledhill, D.C. (2008) New Australian skates (Batoidea: Rajoidei)—background and methodology. In: Last, P.R., White, W.T., Pogonoski, J.J. & Gledhill, D.C. (Eds.), Description of new Australian skates. CSIRO Marine and Atmospheric Research Paper, No. 21, pp. 1–8.

    Leigh, J.W. & Bryant, D. (2015) PopART full-feature software for haplotype network construction. Methods in Ecology and Evolution, 6 (9), 1110–1116.

    https://doi.org/10.1111/2041-210X.12410

    McEachran, J.D. & Dunn, K.A. (1998) Phylogenetic analysis of skates, a morphologically conservative clade of elasmobranchs (Chondrichthyes: Rajidae). Copeia, 1998 (2), 271–290.

    https://doi.org/10.2307/1447424

    McEachran, J.D. & Miyake, T. (1990) Phylogenetic interrelationships of skates: a working hypothesis (Chondrichthyes, Rajoidei). In: Pratt Jr., H.L., Gruber, S.H. & Taniuch, T. (Eds.), Elasmobranchs as living resources: advances in the biology, ecology systematics and the status of the fisheries. NOAA Technical Report NMFS, 90, pp. 285–304.

    Misawa, R., Muto, N., Hamatsu, T., Kim, J.-K. & Kai, Y. (2019a) Genetic population structure and morphological differences in the mottled skate Beringraja pulchra. Japanese Journal of Ichthyology, 66 (1), 23–35. [in Japanese. English abstract]

    Misawa, R., Narimatsu, Y., Endo, H. & Kai, Y. (2019b) Population structure of the ocellate spot skate (Okamejei kenojei) inferred from variations in mitochondrial DNA (mtDNA) sequences and from morphological characters of regional populations. Fishery Bulletin, 117 (1–2), 24–36.

    https://doi.org/10.7755/FB.117.1.4

    Orr, J.W., Stevenson, D.E., Hoff, G.R., Spies, I. & McEachran, J.D. (2011) Bathyraja panthera, a new species of skate (Rajidae: Arhynchobatinae) from the western Aleutian Islands, and resurrection of the subgenus Arctoraja Ishiyama. NOAA Professional Papaer NMFS, 11, 1–50.

    Rice, W.R. (1989) Analyzing tables of statistical tests. Evolution, 43 (1), 223–225.

    https://doi.org/10.1111/j.1558-5646.1989.tb04220.x

    Shirai, S.M., Hirose, T., Goto, T., Kogure, Y. & Yosho, I. (2010) Three predominant species groups of deep-sea whelks (Gastropoda: Buccinidae) in the Sea of Japan: their molecular taxonomy and geographic distribution. Plankton and Benthos Research, 5 (1), 17–30.

    https://doi.org/10.3800/pbr.5.17

    Soldatov, V.K. & Pavlenko, M.N. (1915) Description of a new species of family Rajidae from Peter the Great Bay and from Okhotsk Sea. Ezhegodnik Zoologicheskgo Muzeya Imperatorskoi Akademii Nauk, 20, 162–163, pl. 5.

    Spies, I.B., Gaichas, S., Stevenson, D.E., Orr, J.W. & Canino, M.F. (2006) DNA-based identification of Alaska skates (Amblyraja, Bathyraja and Raja: Rajidae) using cytochrome c oxidase subunit I (coI) variation. Journal of Fish Biology, 69, 283–292.

    https://doi.org/10.1111/j.1095-8649.2006.01286.x

    Spies, I.B., Stevenson, D.E., Orr, J.W. & Hoff, G.R. (2011) Molecular systematics of the skate subgenus Arctoraja (Bathyraja: Rajidae) and support for an undescribed species, the leopard skate, with comments on the phylogenetics of Bathyraja. Ichthyological Research, 58 (1), 77–83.

    https://doi.org/10.1007/s10228-010-0185-z

    Stehmann, M.F.W. (1986) Notes on the systematics of the rajid genus Bathyraja and its distribution in the world oceans. In: Uyeno, T., Arai, R., Taniuchi, T. & Matsuura, K. (Eds.), Indo-Pacific Fish Biology. The Ichthyological Society of Japan, Tokyo, pp. 261–268.

    Stehmann, M.F.W. (1989) Resurrection of Notoraja Ishiyama, 1958 and description of a new species of deep-water skate from the South China Sea Notoraja subtilispinosa sp. nov. (Pisces, Batoidea, Rajidae). Mémoires du Muséum National d'Histoire Naturelle, Serie A, Zoologie, 143, 247–260.

    Stehmann, M.F.W. (2005a) Bathyraja tunae n. sp., a new deep-water skate from the western Indian Ocean (Chondrichthyes, Rajiformes, Rajidae). Journal of Ichthyology, 45 (Supplement 1), S23–S38.

    Stehmann, M.F.W. (2005b) Bathyraja ishiharai n. sp., a new deep-water skate from the eastern Indian Ocean on the Naturalist Plateau off southwestern Australia (Elasmobranchii, Rajiformes, Rajidae). Journal of Ichthyology, 45 (Supplement 1), S39–S57.

    Suda, A., Nagata, N., Sato, A., Narimatsu, Y., Nadiatul, H.H. & Kawata, M. (2017) Genetic variation and local differences in Pacific cod Gadus macrocephalus around Japan. Journal of Fish Biology, 90 (1), 61–79.

    https://doi.org/10.1111/jfb.13154

    Thompson, J.D., Higgins, D.G. & Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research, 22 (22), 4673–4680.

    https://doi.org/10.1093/nar/22.22.4673

    Vargas-Caro, C., Bustamante, C., Bennett, M.B. & Ovenden, J.R. (2017) Towards sustainable fishery management for skates in South America: the genetic population structure of Zearaja chilensis and Dipturus trachyderma (Chondrichthyes, Rajiformes) in the south-east Pacific Ocean. PloS One, 12 (2), e0172255.

    https://doi.org/10.1371/journal.pone.0172255

    Weigmann, S. (2016) Annotated checklist of the living sharks, batoids and chimaeras (Chondrichthyes) of the world, with a focus on biogeographical diversity. Journal of Fish Biology, 88 (3), 837–1037.

    https://doi.org/10.1111/jfb.12874