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Type: Article
Published: 2009-02-23
Page range: 58–68
Abstract views: 45
PDF downloaded: 70

A reassessment of Cuora cyclornata Blanck, McCord and Le, 2006 (Testudines, Geoemydidae) and a plea for taxonomic stability

2320 Storer Hall, University of California, Davis, CA 95616
2320 Storer Hall, University of California, Davis, CA 95616
2320 Storer Hall, University of California, Davis, CA 95616
Reptilia Testudines Geoemydidae

Abstract

We analyze the phylogenetic variation present in the Cuora trifasciata species complex using mitochondrial and nuclear DNA sequence data. We use this information to evaluate the recent description of Cuora cyclornata Blanck, McCord, and Le (2006), and reinterpret this proposed species in light of likely mitochondrial introgression. Our results indicate that the pattern of variation within the Cuora trifasciata species complex is better explained by mitochondrial introgression coupled with hybridization and/or clinal variation, than it is by the presence of a previously unrecognized species. We also use our phylogeny as a framework for discussion of additional proposed changes to generic level taxonomy in this critically imperiled clade. Our results highlight the importance of appropriate data sampling in taxonomic revisions and suggest that Cuora cyclornata be treated as a junior synonym of Cuora trifasciata.

References

  1. Bates, J.M. (2004) A need for continued collecting of avian voucher specimens in Africa: why blood is not enough. The Ostrich, 74, 187–191.

    Bernatchez, L., Glemet, H., Wilson, C.C. & Danzman, R.G. (1995) Introgression and fixation of Arctic char (Salvelinus alpinus) mitochondrial genome in an allopatric population of brook trout (Salvelinus fontanalis). Canadian Journal of Fisheries and Aquatic Sciences, 52.

    Blanck, T. (2005) Cuora yunnanensis (Boulenger, 1906), the Yunnan box turtle, rediscovered after one-hundred years? Radiata, 14, 10–33.

    Cummings, M.P., Neel, M.C. & Shaw, K.L. (2008) A genealogical approach to quantifying lineage divergence. Evolution. https://doi.org/10.1111/j.1558-5646.2008.00442.x

    Blanck, T., McCord, W. P.& Le, M. (2006) On the variability of Cuora trifasciata (Bell, 1825). Frankfurt am Main: Edition Chimaira.

    Cummings, M. P., Neal, M. C., & Shaw, K. L. (2008) A genealogical approach to quantifying lineage divergence. Evolution, 62, 2411–2422.

    de Queiroz, K. (1998) The general lineage concept of species, species criteria, and the process of speciation: A conceptual unification and terminological recommendations. In: Howard, D.J. & Berlocher, S.H. (Eds.), Endless forms: Species and speciation. Oxford University Press, New York.

    Ernst, C. H. & Barbour, R. W. (1989) Turtles of the world. Washington: Smithsonian Institution Press.

    Fong, J.J., Parham, J.F., Shi, H., Stuart, B.L. & Carter, R.L. (2007) A genetic survey of heavily exploited, endangered turtles: caveats on the conservation value of trade animals. Animal Conservation, 10, 452–460.

    Fritz, U. & Havas, P. (2007) Checklist of chelonians of the world. Vertebrate Zoology, 57, 149–368.

    Good, J.M., Demboski, J.R., Nagorsen, D.W. & Sullivan, J. (2003) Phylogeography and introgressive hybridization: Chipmunks (genus Tamias) in the northern Rocky Mountains. Evolution, 57, 1900–1916.

    Good, J.M., Hird, S., Reid, N., Demboski, J.R., Steppan, S.J., Martin-Nims, T.R. (2008) Ancient hybridization and mitochondrial capture between two species of chipmunks. Molecular Ecology, 17, 1313–1327.

    He, J., Zhou, T., Rao, D. & Zhang, Y. (2007) Molecular identification and phylogenetic position of Cuora yunnanensis. Chinese Science Bulletin-English Edition, 52, 3305–3309.

    Honda, M., Yasukawa, Y., Hirayama, R. & Ota, H. (2002) Phylogenetic relationships of the Asian box turtles of the genus Cuora sensu lato (Reptilia: Bataguridae) inferred from mitochondrial DNA sequences. Zoological Science (Tokyo), 19, 1305–1312.

    ICZN (2008) International Commission on Zoological Nomenclature. Available from: www.iczn.org (1 December 2008).

    IUCN (2008) 2008 IUCN Red List of Threatened Species. Available from: www.iucnredlist.org/ (18 August 2008).

    Iverson, J.B. (2008) A checklist of the turtles of the world. Available from: http://www.earlham.edu/biology/documents/TurtleNamesOct07.pdf (26 August 2008).

    Iverson, J.B. & McCord, W.P. (1992a) A new subspecies of Cuora galbinifrons (Testudines: Batagurinae) from Hainan Island, China. Proceedings of the Biological Society of Washington, 105, 433–439.

    Iverson, J.B. & McCord, W.P. (1992b) A new Chinese eyed turtle of the genus Sacalia (Batagurinae: Testudines). Proceedings of the Biological Society of Washington, 105, 426–432.

    Knowles, L.L. & Carstens, B.C. (2007) Delimiting species without monophyletic gene trees. Systematic Biology, 56, 887–895.

    Lovich, J.E. & McCoy, C.J. (1992) Review of the Graptemys pulchra group (Reptilia: Testudines: Emydidae), with descriptions of two new species. Annals of Carnegie Museum, 61, 293–315.

    McCord, W.P. & Iverson, J.B. (1991) A New Box Turtle of the Genus Cuora Testudines Emydidae with Taxonomic Notes and a Key to the Species. Herpetologica, 47, 407–420.

    McCord, W. P. & Iverson, J. B. (1992) A New Species of Ocadia Testudines Bataguridae from Hainan Island China. Proceedings of the Biological Society of Washington, 105, 13–18.

    Melo-Ferreira, J., Boursot, P., Suchentrunk, F., Ferrand, N. & Alves, P. C. (2005) Invasion from the cold past: extensive introgression of mountain hare (Lepus timidus) mitochondrial DNA into three other hare species in northern Iberia. Molecular Ecology, 14, 2459–2464.

    Minin, V., Abdo, Z., Joyce, P. & Sullivan, J. (2003) Performance-based selection of likelihood models for phylogeny estimation. Systematic Biology, 52, 674–683.

    Parham, J. F. & Li, D. (1999) A new locality for Cuora pani Song 1984 with comments on its known range. Asiatic Herpetological Research, 8, 111–113.

    Parham, J.F., Simison, W.B., Kozak, K.H., Feldman, C.R. & Shi, H.T. (2001) New Chinese turtles: endangered or invalid? A reassessment of two species using mitochondrial DNA, allozyme electrophoresis and known-locality specimens. Animal Conservation, 4, 357–367.

    Parham, J.F., & Feldman, C.R. (2002) Generic revisions of emydine turtles. Turtle and Tortoise Newsletter, 6, 28–30.

    Parham, J.F., Stuart, B.L., Bour, R. & Fritz, U. (2004) Evolutionary distinctiveness of the extinct Yunnan box turtle (Cuora yunnanensis) revealed by DNA from an old museum specimen. Proceedings of the Royal Society Biological Sciences Series B, 271, S391–S394.

    Parham, J.F., Türkozan, O., Stuart, B.L., Arakelyan, M., Shafei, S. Macey, J.R., & Papenfuss, T.J. (2006) Genetic evidence for premature taxonomic inflation in Middle Eastern tortoises. Proceedings of the California Academy of Science 57, 955–964.

    Pauly, G.P., Hillis, D.M., & Canatella, D.C. Taxonomic freedom and the role of official lists of species names. Herpetologica, in press.

    Peters, J.L., Zhuravlev, Y., Fefelov, I., Logie, A. & Omland, K.E. (2007) Nuclear loci and coalescent methods support ancient hybridization as cause of mitochondrial paraphyly between gadwall and falcated duck (Anas spp.). Evolution, 61, 1992–2006.

    Pritchard, P.C.H. & McCord, W.P. (1991) A New Emydid Turtle from China. Herpetologica, 47, 139–147.

    Robertson, A.V., Ramsden, C., Niedzwiecki, J., Fu, J. & Bogart, J. P. (2006) An unexpected recent ancestor of unisexual Ambystoma. Molecular Ecology, 15, 3339–3351.

    Rodriques, M., Senneke, D. & Tabaka, C. (2008) The complete chelonian taxonomy list. Available from: http://www.chelonia.org/Turtle_taxonomy.htm (accessed 26 August 2008)

    Shaffer, H.B. & Thomson, R. C. (2007) Delimiting species in recent radiations. Systematic Biology, 56, 896–906.

    Sites, J.W. & Crandall, K.A. (1997) Testing species boundaries in biodiversity studies. Conservation Biology, 11, 1289–1297.

    Sites, J. W. & Marshall, J. C. (2003) Delimiting species: a renaissance issue in systematic biology. Trends in Ecology & Evolution, 18, 462–470.

    Sites, J.W. & Marshall, J.C. (2004) Operational criteria for delimiting species. Annual Review of Ecology and Systematics, 35, 199–227.

    Sorenson, M.D. & Quinn, T. W. (1998) Numts: A challenge for avian systematics and population biology. The Auk, 115, 214–221.

    Spinks, P.Q. & Shaffer, H.B. (2007) Conservation phylogenetics of the Asian box turtles (Geoemydidae, Cuora): mitochondrial introgression, numts, and inferences from multiple nuclear loci. Conservation Genetics, 8, 641–657.

    Spinks, P.Q., Shaffer, H.B., Iverson, J.B. & McCord, W.P. (2004) Phylogenetic hypotheses for the turtle family Geoemydidae. Molecular Phylogenetics and Evolution, 32, 164–182.

    Stuart, B.L. & Parham, J.F. (2004) Molecular phylogeny of the critically endangered Indochinese box turtle (Cuora galbinifrons). Molecular Phylogenetics and Evolution, 31, 164–177.

    Stuart, B.L. & Parham, J.F. (2007) Recent hybrid origin of three rare Chinese turtles. Conservation Genetics, 8, 169–175.

    Swofford, D.L. (1998) PAUP*: phylogenetic analysis using parsimony (*and other methods). Sinauer Associates, Sunderland,MA.

    Turtle Taxonomy Working Group (2007a) Turtle Taxonomy: Methodology, Recommendations, and Guidlines. In: Bickham, J.W. Parham, J.F. ,Philippen, H., Rhodin, A.G.J., Shaffer, H.B. , Spinks, P.Q. & van Dijk , P.P. (Eds.), Defining Turtle Diversity: Proceedings of a Workshop on Genetics, Ethics, and Taxonomy of Freshwater Turtles and Tortoises. Chelonian Research Monographs, pp. 73–84.

    Turtle Taxonomy Working Group (2007b) An annotated list of modern turtle terminal taxa, with comments on areas of taxonomic instability and recent change. In: Shaffer, H.B., Georges, A., Fitzsimmons, N.N. & Rhodin, A.G. J (Eds.), Defining Turtle Diversity: Proceedings of a Workshop on Genetics, Ethics, and Taxonomy of Freshwater Turtles and Tortoises. Chelonian Research Monographs, pp. 173–199.

    van Dijk, P. P., Stuart, B. L. & Rhodin, A. G. J. (2000) Asian turtle trade: proceedings of a workshop on conservation and trade of freshwater turtles and tortoises in Asia. Chelonian Research Monographs, 2.

    Wilson, C. C. & Bernatchez, L. (1998) The ghost of hybrids past: fixation of arctic charr (Salvelinus alpinus) mitochondrial DNA in an introgressed population of lake trout (S. namaycush). Molecular Ecology, 7, 127–132.

    Wink, M., Guicking, D. & Fritz, U. (2000) Molecular evidence for hybrid origin of Mauremys iversoni Pritchard et McCord, 1992 and Mauremys pritchardi McCord, 1997 (Reptilia: Testudines: Bataguridae). Zoologische Abhandlungen (Dresden), 51, 41–49.

    Zhou, T. & Zhao, E. (2004) On the occurrence of living Cuora yunnanensis since fifty-eight years, and its description. Sichuan Journal of Zoology, 23, 325–326.