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Type: Article
Published: 2019-06-07
Page range: 117–126
Abstract views: 123
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Morphological and mtDNA data reveal broader distribution of Alburnoides holciki (Teleostei: Leuciscidae) in inland waters of Central Asia

Papanin Institute of Biology of Inland Waters, Russian Academy of Sciences, 152742 Borok, Yaroslavl Province, Russia Cherepovets State University, Vologda Region, Cherepovets, Russia
Department of Environmental Studies, Feather River College, Quincy, CA, USA Field Museum of Natural History, 1400 S. Lakeshore dr., Chicago IL 60605, USA
Mordovian State Nature Reserve, Mordovia, Russia
Papanin Institute of Biology of Inland Waters, Russian Academy of Sciences, 152742 Borok, Yaroslavl Province, Russia
Papanin Institute of Biology of Inland Waters, Russian Academy of Sciences, 152742 Borok, Yaroslavl Province, Russia
Institute of Zoology and Parasitology, National Academy of Sciences of Tajikistan, Dushanbe, Tajikistan
Institute of Zoology and Parasitology, National Academy of Sciences of Tajikistan, Dushanbe, Tajikistan
Institute of Systematics and Ecology of Animals, Siberian Branch of Russian Academy of Sciences, Novosibirsk, Russia
Pisces Riffle Minnow taxonomy Amu Darya Tajikistan DNA barcoding

Abstract

Alburnoides holciki was described from the Hari River basin, which was the only basin it was known from. Populations from the Amu Darya basin were previously recognized as A. eichwaldii or Alburnoides sp. Our study recognized specimens of Alburnoides from the Amu Darya basin as A. holciki based on morphological data and the COI barcode gene. The population from the Zeravshan basin showed some morphological differences compared to others but were similar in the COI gene and needs further investigation. New results extend the range of A. holciki for almost 1000 km ­from the Hari River to the upper Amu Darya tributaries in Tajikistan. The intraspecific genetic similarity in the COI gene between populations in the Hari and Amu Darya rivers supports the geographical hypothesis of a recent connection of these rivers.

 

References

  1. Aljanabi, S.M. & Martinez, I. (1997) Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques. Nucleic acids research, 25 (22), 4692–4693.

    https://doi.org/10.1093/nar/25.22.4692

    Aliev, D.S., Sukhanova, A.I. & Shakirova, F.M. (1988) Fishes of inland waters of Turkmenistan. Ashkhabad, Ilim, 156 pp. [in Russian]

    Bandelt, H.J., Forster, P. & Rohl, A. (1999) Median-joining networks for inferring intraspecific phylogenies. Molecular Biology and Evolution, 16, 37–48.

    https://doi.org/10.1093/oxfordjournals.molbev.a026036

    Bartold, V.V. (2002) Raboty po istoricheskoi geografii [Studies on the historical geography]. Vostochnaya Literatura, Moscow, 711 pp.[in Russian]

    Berg, L.S. (1905) Fishes of Turkestan. Scientific results of the Aral expedition, No. 6, St. Petersburg, 261 pp. [in Russian]

    Berg, L.S. (1949) Fishes of Fresh Waters of the USSR and Adjacent Countries. Pt. 2. Akad. Nauk SSSR, Moscow, 469–925 pp. [in Russian]

    Bogutskaya, N.G. & Coad, B.W. (2009) A review of vertebral and fin-ray counts in the genus Alburnoides (Teleostei: Cyprinidae) with a description of six new species. Zoosystematica Rossica, 18 (1), 126–173.

    Coad, B.W. & Bogutskaya, N.G. (2012) A new species of riffle minnow, Alburnoides holciki, from the Hari River basin in Afghanistan and Iran (Actinopterygii: Cyprinidae). Zootaxa, 3453, 43–55.

    Gouy, M., Guindon, S. & Gascuel, O. (2009) SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Molecular Biology and Evolution, 27 (2), 221–224.

    https://doi.org/10.1093/molbev/msp259

    Hubbs, C.L. & Lagler, K.F. (1958) Fishes of the Great Lakes Region. University of Michigan Press, Ann Arbor, xv + 213 pp.

    Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: molecular evolutionary genetics analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33 (7), 1870–1874.

    https://doi.org/10.1093/molbev/msw054

    Kustareva, L.A. & Naseka, A.M. (2015) Fish diversity in Kyrgyzstan: Species composition, fisheries and management problems. Aquatic Ecosystem Health & Management, 18 (2), 149–159.

    https://doi.org/10.1080/14634988.2015.1028309

    Ivanova, N.V., Zemlak, T.S., Hanner, R.H. & Hebert, P.D. (2007) Universal primer cocktails for fish DNA barcoding. Molecular Ecology Notes, 7 (4), 544–548.

    https://doi.org/10.1111/j.1471-8286.2007.01748.x

    Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T. & Calcott, B. (2016) PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution, 34 (3), 772–773.

    https://doi.org/10.1093/molbev/msw260

    Leigh, J.W. & Bryant, D. (2015) POPART: full-feature software for haplotype network construction. Methods in Ecology and Evolution, 6, 1110–1116.

    https://doi.org/10.1111/2041-210X.12410

    Levin, B.A. (2011) Ontogenetic causes and mechanisms for formation of differences in number of fish scales. Russian Journal of Developmental Biology, 42 (3), 186–191.

    https://doi.org/10.1134/S1062360411030106

    Levin, B.A., Simonov, E., Matveyev, M.P., Artaev, O.N., Mustafayev, N.J., Pashkov, A.N. & Roubenyan, H.R. (2018) DNA barcoding of the fishes of the genus Alburnoides (Actinopterygii, Cyprinidae) from Caucasus. Mitochondrial DNA, Part A, 29 (1), 49–55.

    https://doi.org/10.1080/24701394.2016.1238900

    Matveyev, M.P., Levina, M.A., Mamilov, N.S. & Levin, B.A. (2017) Tashkent riffle minnow Alburnoides oblongus belongs to the genus Alburnus (Osteichthyes: Cyprinidae) as inferred from mitochondrial and nuclear DNA markers. Inland Water Biology, 10 (4), 360–367.

    https://doi.org/10.1134/S1995082917030105

    Mina, M.V., Levin, B.A. & Mironovsky, A.N. (2005) On the possibility of using character estimates obtained by different operators in morphometric studies of fish. Journal of Ichthyology, 45 (4), 284–294.

    Naseka, A.M. (1996) Comparative study on the vertebral column in the Gobioninae (Cyprinidae, Pisces) with special reference to its systematics. Publicaciones especiales del Instituto Español de Oceanografiìa, 21, 149–167.

    Nguyen, L.-T., Schmidt, H.A., von Haeseler, A. & Minh, B.Q. (2015) IQ-TREE: A fast and effective stochastic algorithm for estimating maximum likelihood phylogenies. Molecular Biology and Evolution, 32, 268–274.

    https://doi.org/10.1093/molbev/msu300

    Nikolskiy, G.V. (1938) Fishes of Tajikistan. Izd-vo Akademii nauk SSSR, Moscow-Leningrad, 228 pp. [in Russian]

    Panov, B.P. (1971) Lections on hydrography of USSR. Izdatelstvo LPI, Leningrad, 188 pp. [in Russian]

    Pavlov, D.S., Aliev, D.S., Shakirova, F.M., Nezdoliy, V.K., Ostrovskiy, M.P., Dzhemileva, T.G., Malakhova, T.V., Nikolaev, A.A. & Sukhanova, A.I. (1994) Biology of Fishes of the Saryyazynskoe Reservoir. Gidroproect, Ashgabad-Moscow, 150 pp. [in Russian]

    Rambaut, A. (2014) FigTree 1.4.2 software. Institute of Evolutionary Biology, Univ. Edinburgh, Edinburgh. [program]

    Rambaut, A., Drummond, A.J., Xie, D., Baele, G. & Suchard, M.A. (2018) Posterior summarisation in Bayesian phylogenetics using Tracer 1.7. Systematic Biology, 67 (5), 901–904.

    https://doi.org/10.1093/sysbio/syy032

    Ronquist, F. & Huelsenbeck, J.P. (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19 (12), 1572–1574.

    https://doi.org/10.1093/bioinformatics/btg180

    Rozas, J., Ferrer-Mata, A., Sánchez-DelBarrio, J.C., Guirao-Rico, S., Librado, P., Ramos-Onsins, S.E. & Sánchez-Gracia, A. (2017) DnaSP 6: DNA sequence polymorphism analysis of large data sets. Molecular Biology and Evolution, 34 (12), 3299–3302.

    https://doi.org/10.1093/molbev/msx248

    Sokolov, A.A. (1952) Hydrography of the USSR. Gidrometeoizdat, Leningrad, pp. 356.

    Stierandová, S., Vukić, J., Vasil’eva, E.D., Zogaris, S., Shumka, S., Halačka, K., Vetešník, L., Švátora, M., Nowak, M., Stefanov, T., Koščo, J. & Mendel, J. (2016) A multilocus assessment of nuclear and mitochondrial sequence data elucidates phylogenetic relationships among European spirlins (Alburnoides, Cyprinidae). Molecular Phylogenetics and Evolution, 94, 479–491.

    https://doi.org/10.1016/j.ympev.2015.10.025

    Thoni, R.J., Simonov, E., Artaev, O., Asylbaeva, S., Aibek, S.U. & Levin, B.A. (2017) A century in synonymy: molecular and morphological evidence for the revalidation of Glyptosternon osсhanini (Herzenstein, 1889) (Actinopterygii: Sisoridae). Zootaxa, 4277 (3), 435–442.

    https://doi.org/10.11646/zootaxa.4277.3.8