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Type: Article
Published: 2024-01-10
Page range: 37-51
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The first record of Egglestonichthys bombylios (Gobiiformes: Gobiidae) from China with its first fresh colouration information

East China Sea Fisheries Research Institute; Fisheries Science of Chinese Academy; Shanghai; 200090; China
College of Fisheries and Life Science; Shanghai Ocean University; Shanghai; 201306; China
East China Sea Fisheries Research Institute; Fisheries Science of Chinese Academy; Shanghai; 200090; China; College of Fisheries and Life Science; Shanghai Ocean University; Shanghai; 201306; China
East China Sea Fisheries Research Institute; Fisheries Science of Chinese Academy; Shanghai; 200090; China
Zhejiang Institute of Hydraulics & Estuary (Zhejiang Institute of Marine Planning and Design); Hangzhou; 310017; China
East China Sea Fisheries Research Institute; Fisheries Science of Chinese Academy; Shanghai; 200090; China
College of Fisheries and Life Science; Shanghai Ocean University; Shanghai; 201306; China
Pisces Egglestone’s bumblebee goby first record morphology mitochondrial genome Fujian Zhejiang South China Sea

Abstract

During bottom trawl surveys carried out between 2013–2021, 52 specimens (33.8–54.0 mm SL) of Egglestone’s bumblebee goby Egglestonichthys bombylios were collected at a depth of 1.5–15 m from Dongshan Bay, Sanmen Bay, and Niushan Island, China. They represent the first records of this species from China. A full description, including fresh colouration of the species is provided as it is poorly known. The individuals collected in China agree with most morphological features of the holotype, except for the pelvic fin fraenum that was not observed or appears to be absent in most specimens. A strong relationship between E. bombylios, Larsonella pumilus, and the genus Priolepis is herein demonstrated by the mitochondrial genome sequences of E. bombylios and twenty closely related species. This study enriches the existing genetic data of the so-called Priolepis lineage and provides useful insights into the phylogenetic relationships across species of the genera Egglestonichthys, Priolepis, and Larsonella.

 

References

  1. Akihito Prince, Hayashi, M. & Yoshino, T. (1984) Suborder Gobioidea. In: Masuda, H., Amaoka, K., Araga, C., Uyeno, T. & Yoshino T. (Eds.), The Fishes of the Japanese Archipelago. Tokai University Press, Tokyo, pp. 236–289, pls. 235–258, 353–355.
  2. Akihito, Sakamotu, K., Iwata, A. & Ikeda, Y. (1993) Cephalic sensory organs of gobioid fishes. In: Nakabo, T. (Ed.), Fishes of Japan with Pictorial Keys to the Species. Tokai University Press, Tokyo, pp. 1088–1116.
  3. Allen, G.R., Erdmann, M.V. & Brooks, W.M. (2020) Egglestonichthys rubidus, a new species of marine goby (Pisces: Gobiidae) from Milne Bay Province, Papua New Guinea. aqua International Journal of Ichthyology, 26, 41–48.
  4. Birdsong, R.S., Murdy, E.O. & Pezold, F.L. (1988) A study of the vertebral column and median fin osteology in gobioid fishes with comments on gobioid relationships. Bulletin of Marine Science, 42 (2), 174–214.
  5. Dingerkus, G, Uhler, L.D. (1977). Enzyme clearing of alcian blue stained whole small vertebrates for demonstration of cartilage. Stain Techn., 52: 229–232. https://doi.org/10.3109/10520297709116780
  6. Donath, A., Jühling, F., Al-Arab, M., Bernhart, S.H., Reinhardt, F., Stadler, P.F., Middendorf M. & Bernt, M. (2019) Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes. Nucleic Acids Research, 47 (20), 10543–10552. https://doi.org/10.1093/nar/gkz833
  7. Evans, J.L., Thia, J.A., Riginos, C. & Hereward, J.P. (2018) The complete mitochondrial genome of Bathygobius cocosensis (Perciformes, Gobiidae). Mitochondrial DNA Part B, 3 (1), 217–219. https://doi.org/10.1080/23802359.2018.1437824
  8. Fricke, R., Eschmeyer, W.N. & Fong, J.D. (Eds.) (2023) Catalog of fishes: genera, species, references. Available from: http://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp (accessed 6 July 2023)
  9. Fujiwara, K., Suzuki, T. & Motomura, H. (2020) A new species of Egglestonichthys (Teleostei, Gobiiformes, Gobiidae) from Okinawa Island, Japan. ZooKeys, 1006, 91–98. https://doi.org/10.3897/zookeys.1006.58874
  10. Fu’adil Amin, M.H., Tabassum, N., Kim, A.R., Lee, D.S. & Kim, H.W. (2020) Mitogenome Announcement Characterization of the complete mitochondrial genome of golden tank goby, Glossogobius aureus (Perciformes: Gobiidae). Mitochondrial DNA Part B, 5 (4), 3817–3818. https://doi.org/10.1080/23802359.2020.1840943
  11. Hanahara, N., Higashiji, T., Shinzato, C., Koyanagi, R. & Maeda, K. (2019) First record of Larsonella pumilus (Teleostei: Gobiidae) from Japan, with phylogenetic placement of the genus Larsonella. Zootaxa, 4695 (4), 367–377. https://doi.org/10.11646/zootaxa.4695.4.4
  12. Hoese, D.F., Bray, D.J., Paxton, J.R. & Allen, G.R. (2006) Fishes. In: Beesley, P.L. & Wells, A. (eds) Zoological catalogue of Australia. Volume 35. Parts 1–3. ABRS and CSIRO Publishing, Canberra, 2178 pp.
  13. Jin, J.J., Yu, W.B., Yang, J.B., Song, Y., DePamphilis, C.W., Yi, T.S. & Li, D.Z. (2020) GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes. Genome Biology, 21, 1–31. https://doi.org/10.1186/s13059-020-02154-5
  14. Kalyaanamoorthy, S., Minh, B.Q., Wong, T.K.F., von Haeseler, A. & Jermiin, L.S. (2017) ModelFinder: fast model selection for accurate phylogenetic estimates. Nature Methods, 14 (6), 587–589. https://doi.org/10.1038/nmeth.4285
  15. Katoh, K. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Research, 30 (14), 3059–3066. https://doi.org/10.1093/nar/gkf436
  16. Larson, H.K. (2013) A new species of Egglestonichthys from northern Australian estuaries (Teleostei, Gobiidae, Gobiinae). aqua International Journal of Ichthyology, 19, 147–154.
  17. Larson, H.K. & Hoese, D.F. (1997) A new species of Egglestonichthys (Teleostei: Gobiidae) from the Indo-West Pacific, with discussion of the species of the genus. The Beagle, Records of the Museums and Art Galleries of the Northern Territory, 13, 45–51. https://doi.org/10.5962/p.264291
  18. Larson, H.K. & Murdy, E.O. (2001) Families Eleotridae, Gobiidae. In: Carpenter, K. E., Niem, V. H. (Eds.), Species identification guide for fishery purposes. The living marine resources of the western central Pacific. Bony fishes part 4 (Labridae to Latimeriidae), estuarine crocodiles, sea turtles, sea snakes and marine mammals. FAO, Rome. v. 6, pp. 3574–3603.
  19. Larson, H.K., Williams R.S. & Hammer M.P. (2013) An annotated checklist of the fishes of the Northern Territory, Australia. Zootaxa, 3696 (1), 1–293. https://doi.org/10.11646/zootaxa.3696.1.1
  20. Letunic, I. & Bork, P. (2016) Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees. Nucleic Acids Research, 44 (W1), W242–W245. https://doi.org/10.1093/nar/gkw290
  21. Ma, Z., Huang, Z., Zhang, S., Xie, L., Yang, X., Zhang, X. & Yang, R. (2015) The complete mitochondrial genome of Micropercops swinhonis (Perciformes: Gobioidei: Odontobutidae). Mitochondrial DNA, 26 (1), 116–117. https://doi.org/10.3109/19401736.2013.809446
  22. Manilo, L.G. & Bogorodsky, S.V. (2003) Taxonomic composition, diversity and distribution of coastal fishes of the Arabian Sea. Journal of Ichthyology, 43 (1), S75–S149.
  23. Meng, G., Li, Y., Yang, C. & Liu, S. (2019) MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization. Nucleic Acids Research, 47 (11), e63. https://doi.org/10.1093/nar/gkz173
  24. Miller, P.J. & Wongrat, P. (1979) A new goby (Teleostei: Gobiidae) from the South China Sea and its significance for gobioid classification. Zoological Journal of the Linnean Society, 67, 239–257. https://doi.org/10.1111/j.1096-3642.1979.tb01114.x
  25. Motomura, H., Alama, U.B., Muto, N., Babaran, R.P. & Ishikawa, S. (Eds.) (2017) Commercial and bycatch market fishes of Panay Island, Republic of the Philippines. The Kagoshima University Museum, Kagoshima, University of the Philippines Visayas, Iloilo, and Research Institute for Humanity and Nature, Kyoto, Japan, 198 pp.
  26. Nguyen, L.T., Schmidt, H.A., Von Haeseler, A. & Minh, B.Q. (2015) IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies. Molecular Biology and Evolution, 32 (1), 268–274. https://doi.org/10.1093/molbev/msu300
  27. Prokofiev, A.M. (2016) Gobies (Gobioidei) of soft bottoms from Nha Trang and Van Phong bays (South China Sea, Vietnam). Journal of Ichthyology, 56 (6), 799–817. https://doi.org/10.1134/S0032945216060096
  28. Rao, V.V. (1971) New gobioids from Godavari estuary. Journal of the Zoological Society of India, 23 (1), 39–54. https://doi.org/10.2307/1442445
  29. Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard M.A. & Huelsenbeck, J.P. (2012) MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space. Systematic Biology, 61 (3), 539–542. https://doi.org/10.1093/sysbio/sys029
  30. Saruwatari, T., López, J.A. & Pietsch, T.W. (1997) Cyanine blue: a versatile and harmless stain for specimen observation. Copeia, 1997, 840–841. https://doi.org/10.2307/1447302
  31. Sugiura, N. (1978). Further analysis of the data by akaike's information criterion and the finite corrections. Communications in Statistics - Theory and Methods, 7 (1), 13–26. https://doi.org/10.1080/03610927808827599
  32. Sun, Y., Wei, T., Jin, X., Qin, Y. & Xu, T. (2015) Complete mitochondrial genome of the urohaze-goby Glossogobius olivaceus (Perciformes, Gobiidae) and structure comparison of light strand replication origin in Gobioidei. Mitochondrial DNA, 26(6), 964–966. https://doi.org/10.3109/19401736.2013.865177
  33. Talavera, G. & Castresana, J. (2007) Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments. Systematic Biology, 56 (4), 564–577. https://doi.org/10.1080/10635150701472164
  34. Taylor, W.R. & Van Dyke, G.C. (1985) Revised procedures for staining and clearing small fishes and other vertebrates for bone and cartilage study. Cybium, 9, 107–119.
  35. Thacker, C.E. (2015) Biogeography of goby lineages (Gobiiformes: Gobioidei): origin, invasions and extinction throughout the Cenozoic. Journal of Biogeography, 42, 1615–1625. https://doi.org/10.1111/jbi.12545
  36. Wang, P., Zhao, C., Fan, S., Yan, L. & Qiu, L. (2018) Characterization and phylogenetic analysis of the complete mitochondrial genome of Glossogobius giuris (Perciformes: Gobiidae). Mitochondrial DNA Part B, 3(1), 395–396. https://doi.org/10.1080/23802359.2018.1456372
  37. Wei, T., Jin, X.X. & Xu, T.J. (2013) The first complete mitochondrial genome from Bostrychus genus (Bostrychus sinensis) and partitioned Bayesian analysis of Eleotridae fish phylogeny. Journal of Genetics, 92, 247–257. https://doi.org/10.1007/s12041-013-0259-6
  38. Winterbottom, R. & Burridge, M. (1992). Revision of Egglestonichthys and of Priolepis species possessing a transverse pattern of cheek papillae (Teleostei; Gobiidae), with a discussion of relationships. Canadian Journal of Zoology, 70 (10), 1934–1946. https://doi.org/10.1139/z92-263
  39. Wu H.L. & Zhong J.S. (Eds.) (2008) Fauna Sinica. Ostichthyes, Perciformes (V), Gobioidei. Science Press, Beijing, pp. 951. [In Chinese]
  40. Zhang, D., Gao, F., Jakovlić, I., Zhou, H., Zhang, J., Li, W.X. & Wang, G.T. (2020) PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Molecular Ecology Resources, 20 (1), 348–355. https://doi.org/10.1111/1755-0998.13096